SCMCP
Rank #10,168glama/scmcphub/scmcp
An MCP server that enables scRNA-Seq analysis through natural language, providing tools for data preprocessing, clustering, and biological visualization. It supports both predefined function execution and a flexible code mode powered by a Jupyter backend for automated single-cell transcriptomics workflows.
SCMCP is a Model Context Protocol (MCP) server published by scmcphub. It ranks #10,168 of 115,460 servers tracked on MCP Toplist, and its repository has 16 GitHub stars. SCMCP is listed on Glama, with 5 release tags tracked from its GitHub repository. It was first listed on May 29, 2025 and most recently updated on Jul 7, 2025.
Ranks ahead of 105,292 of 115,460 servers on MCP Toplist.
Use SCMCP
No credentials or required configuration declared — add it to your MCP client and go.
This server doesn't publish a machine-readable install config — see the repository README for install instructions.
Show your rank
Maintain this server? Add the live rank badge to your README — it updates automatically as the leaderboard changes.
[](https://mcptoplist.com/server/glama%2Fscmcphub%2Fscmcp)<a href="https://mcptoplist.com/server/glama%2Fscmcphub%2Fscmcp"><img src="https://mcptoplist.com/badge/glama%2Fscmcphub%2Fscmcp.svg" alt="MCP Toplist: Top 10% of 115,460" /></a>Variants: append ?metric=score or ?metric=stars to the image URL.
Listed on 1 registry
scmcphub
Other servers by scmcphub
- decoupler-MCP#16,952 · 5 vers
- cellrank-mcp#22,164 · 5 vers
- Scanpy-MCP#22,165 · 5 vers
- biomarker-mcp#22,597 · 3 vers
- Infercnv-MCP#25,899 · 3 vers
- Liana-MCP#28,261 · 5 vers
GitHub releases (5)
No registry surfaces explicit version metadata for this server. The list below shows release tags from the linked GitHub repository.
| Version | Published |
|---|---|
| v0.5.0 | Jul 7, 2025 |
| v0.4.0 | Jun 27, 2025 |
| v0.3.2 | Jun 2, 2025 |
| v0.3.1 | Jun 1, 2025 |
| v0.3.0 | May 29, 2025 |
Frequently asked questions
- Who maintains SCMCP?
- SCMCP is maintained by scmcphub, which publishes 7 MCP servers (31 total versions) tracked on MCP Toplist.
- Is SCMCP listed on the Official MCP Registry?
- SCMCP is not on the Official MCP Registry. It is listed on Glama.
- How many versions does SCMCP have?
- No registry surfaces explicit version metadata for SCMCP; MCP Toplist tracks 5 release tags from its GitHub repository, most recently published on Jul 7, 2025.
- Where can I find the source code for SCMCP?
- The source code for SCMCP is hosted at github.com/scmcphub/scmcp.