SCMCP
Rank #13,579glama/scmcphub/scmcp
An MCP server that enables scRNA-Seq analysis through natural language, providing tools for data preprocessing, clustering, and biological visualization. It supports both predefined function execution and a flexible code mode powered by a Jupyter backend for automated single-cell transcriptomics workflows.
What you can do with SCMCP
SCMCP is a Model Context Protocol (MCP) server published by scmcphub. It ranks #13,579 of 144,396 active servers on MCP Toplist, and its repository has 16 GitHub stars. SCMCP is listed on Glama, with 5 release tags tracked from its GitHub repository. It was first listed on May 29, 2025 and most recently updated on Jul 7, 2025.
Not verifiedMCP Toplist has not yet written a checked profile for this server, so the paragraph above is assembled from registry data only. The repository README is the authority on what it does.
What SCMCP can and cannot do
Not verifiedMCP Toplist has not catalogued this server's tools or limitations. The repository README lists them.
What you need before using SCMCP
The registry listing declares no required environment variables or authentication. This is declared metadata, not a verified install — the repository README is the authority.
Declared by Glama, last synced Oct 16, 2026. Not independently verified by MCP Toplist.
No runtime, credential or payment requirements are recorded for this server beyond the declaration above.
Connect SCMCP and confirm it works
Install configuration unavailable. No registry publishes a machine-readable install config for this server — follow the repository README.
After adding the config, ask your client to list this server's tools. A tool list confirms the connection; an empty list or an error means the server did not start or needs credentials.
When to choose another server
- decoupler-MCP#23,321
- cellrank-mcp#30,794
- Scanpy-MCP#30,795
- biomarker-mcp#31,367
- Infercnv-MCP#35,627
- Liana-MCP#38,362
No task-specific alternatives are catalogued for SCMCPyet; the list above is its publisher's other servers.
What changed, and when this was checked
- First listed
- May 29, 2025
- Latest release tag
- Jul 7, 2025
- Version history
- 5 release tags tracked (below)
- Requirements evidence
- Declared by Glama, last synced Oct 16, 2026. Not independently verified by MCP Toplist.
- Profile checked
- Not yet — purpose, capabilities and requirements above come from registry data only
- Ranking data as of
- Oct 16, 2026
- Glama ↗listed since Apr 26, 2026 · still listed
Do you maintain SCMCP? to correct or enrich this profile.
GitHub releases (5)
No registry surfaces explicit version metadata for this server. The list below shows release tags from the linked GitHub repository.
| Version | Published |
|---|---|
| v0.5.0 | Jul 7, 2025 |
| v0.4.0 | Jun 27, 2025 |
| v0.3.2 | Jun 2, 2025 |
| v0.3.1 | Jun 1, 2025 |
| v0.3.0 | May 29, 2025 |
Ranks ahead of 130,817 of 144,396 servers on MCP Toplist.
Show your rank
Maintain this server? Add the live rank badge to your README — it updates automatically as the leaderboard changes.
[](https://mcptoplist.com/server/glama%2Fscmcphub%2Fscmcp)<a href="https://mcptoplist.com/server/glama%2Fscmcphub%2Fscmcp"><img src="https://mcptoplist.com/badge/glama%2Fscmcphub%2Fscmcp.svg" alt="MCP Toplist: Top 10% of 144,396" /></a>Variants: append ?metric=score or ?metric=stars to the image URL.
Frequently asked questions
- Who maintains SCMCP?
- SCMCP is maintained by scmcphub, which publishes 7 MCP servers (31 total versions) tracked on MCP Toplist.
- Is SCMCP listed on the Official MCP Registry?
- SCMCP is not on the Official MCP Registry. It is listed on Glama.
- How many versions does SCMCP have?
- No registry surfaces explicit version metadata for SCMCP; MCP Toplist tracks 5 release tags from its GitHub repository, most recently published on Jul 7, 2025.
- Where can I find the source code for SCMCP?
- The source code for SCMCP is hosted at github.com/scmcphub/scmcp.
Do you run this server?
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