Scanpy-MCP
Rank #27836glama/scmcphub/scanpy-mcp
Provides a natural language interface for scRNA-Seq analysis using the Scanpy library, supporting operations such as data preprocessing, clustering, and visualization. It enables AI agents and clients to perform complex single-cell transcriptomics workflows through the Model Context Protocol.
Scanpy-MCP is a Model Context Protocol (MCP) server published by scmcphub. It ranks #27836 of 58,832 servers tracked on MCP Toplist, and its repository has 2 GitHub stars. Scanpy-MCP is listed across 2 registries — Glama and mcp.so, and ships as a single rolling release with no explicit version metadata. It was first listed on Jun 2, 2025.
Ranks ahead of 30,996 of 58,832 servers on MCP Toplist.
Use Scanpy-MCP
Scanpy-MCP doesn’t publish a machine-readable install config. Follow the setup instructions in its repository ↗, or open one of its registry listings above.
Listed on 2 registries
scmcphub
Other servers by scmcphub
View all scmcphub servers →Not versioned
This server is published through registries that do not expose explicit version metadata. The listing tracks a single rolling release.
Frequently asked questions
- What is Scanpy-MCP?
- Provides a natural language interface for scRNA-Seq analysis using the Scanpy library, supporting operations such as data preprocessing, clustering, and visualization. It enables AI agents and clients to perform complex single-cell transcriptomics workflows through the Model Context Protocol.
- Who maintains Scanpy-MCP?
- Scanpy-MCP is maintained by scmcphub, which publishes 6 MCP servers (0 total versions) tracked on MCP Toplist.
- Is Scanpy-MCP an official MCP server?
- Scanpy-MCP is not on the Official MCP Registry. It is listed on Glama and mcp.so.
- How many versions does Scanpy-MCP have?
- Scanpy-MCP ships as a single rolling release with no explicit version metadata.
- Where can I find the source code for Scanpy-MCP?
- The source code for Scanpy-MCP is hosted at github.com/scmcphub/scanpy-mcp.