SERVER

Ensembl

Rank #29015

pulsemcp/pipeworx-ensembl

Query Ensembl REST for vertebrate genomes, sequences, comparative genomics, and variation data.

First listed
May 15, 2026
Last publish date
May 16, 2026
OVERVIEW

Ensembl is a Model Context Protocol (MCP) server published by pipeworx-io. It ranks #29015 of 58,900 servers tracked on MCP Toplist. Ensembl is listed across 2 registries — Official MCP and PulseMCP, with 1 tracked version. It was first listed on May 15, 2026 and most recently updated on May 16, 2026.

STANDING
#29,015of 58,900 tracked serversTop 50%

Ranks ahead of 29,885 of 58,900 servers on MCP Toplist.

CONNECT

Use Ensembl

Add Ensembl to any MCP client (Claude, Cursor, VS Code, …) with one of the configs below.

Remote · HTTP
{
  "mcpServers": {
    "pipeworx-ensembl": {
      "url": "https://gateway.pipeworx.io/ensembl/mcp"
    }
  }
}
REGISTRIES

Listed on 2 registries

ORGANIZATION

pipeworx-io

Organization
Total servers
578
Total versions
440
MORE FROM THIS PUBLISHER

Other servers by pipeworx-io

View all pipeworx-io servers →
VERSIONS

Available versions (1)

VersionPublished
0.1.0May 16, 2026
FAQ

Frequently asked questions

What is Ensembl?
Query Ensembl REST for vertebrate genomes, sequences, comparative genomics, and variation data.
Who maintains Ensembl?
Ensembl is maintained by pipeworx-io, which publishes 578 MCP servers (440 total versions) tracked on MCP Toplist.
Is Ensembl an official MCP server?
Yes — Ensembl is listed on the Official MCP Registry, alongside PulseMCP.
How many versions does Ensembl have?
MCP Toplist tracks 1 version of Ensembl, most recently published on May 16, 2026.
Where can I find the source code for Ensembl?
The source code for Ensembl is hosted at github.com/pipeworx-io/mcp-ensembl.
EXPLORE
Ensembl - MCP Server #29015 | MCP Toplist