Scanpy MCP server
Rank #21,384mcp.so/scanpy-mcp/huang-sh
MCP server for Scanpy
What you can do with Scanpy MCP server
Scanpy MCP server is a Model Context Protocol (MCP) server published by huang-sh. It ranks #21,384 of 168,415 active servers on MCP Toplist, and its repository has 11 GitHub stars. Scanpy MCP server is listed on mcp.so, with 3 release tags tracked from its GitHub repository. It was first listed on Apr 9, 2025 and most recently updated on Apr 11, 2025.
Not verifiedMCP Toplist has not yet written a checked profile for this server, so the paragraph above is assembled from registry data only. The repository README is the authority on what it does.
What Scanpy MCP server can and cannot do
Not verifiedMCP Toplist has not catalogued this server's tools or limitations. The repository README lists them.
What you need before using Scanpy MCP server
No registry MCP Toplist tracks declares this server’s credentials or configuration, and it has no public endpoint to probe. Check the repository README before installing.
No runtime, credential or payment requirements are recorded for this server beyond the declaration above.
Connect Scanpy MCP server and confirm it works
Install configuration unavailable. No registry publishes a machine-readable install config for this server — follow the repository README.
After adding the config, ask your client to list this server's tools. A tool list confirms the connection; an empty list or an error means the server did not start or needs credentials.
When to choose another server
No task-specific alternatives are catalogued for Scanpy MCP serveryet; the list above is its publisher's other servers.
What changed, and when this was checked
- First listed
- Apr 9, 2025
- Latest release tag
- Apr 11, 2025
- Version history
- 3 release tags tracked (below)
- Requirements evidence
- None — no registry declares requirements and there is no public endpoint to probe
- Profile checked
- Not yet — purpose, capabilities and requirements above come from registry data only
- Ranking data as of
- Nov 4, 2026
- mcp.so ↗listed since May 22, 2026 · still listed
Do you maintain Scanpy MCP server? to correct or enrich this profile.
GitHub releases (3)
No registry surfaces explicit version metadata for this server. The list below shows release tags from the linked GitHub repository.
| Version | Published |
|---|---|
| v0.1.2 | Apr 11, 2025 |
| v0.1.1 | Apr 11, 2025 |
| v0.1.0 | Apr 10, 2025 |
Ranks ahead of 147,031 of 168,415 servers on MCP Toplist.
Show your rank
Maintain this server? Add the live rank badge to your README — it updates automatically as the leaderboard changes.
[](https://mcptoplist.com/server/mcp.so%2Fscanpy-mcp%2Fhuang-sh)<a href="https://mcptoplist.com/server/mcp.so%2Fscanpy-mcp%2Fhuang-sh"><img src="https://mcptoplist.com/badge/mcp.so%2Fscanpy-mcp%2Fhuang-sh.svg" alt="MCP Toplist: Top 25% of 168,415" /></a>Variants: append ?metric=score or ?metric=stars to the image URL.
Frequently asked questions
- Who maintains Scanpy MCP server?
- Scanpy MCP server is maintained by huang-sh, which publishes 2 MCP servers (7 total versions) tracked on MCP Toplist.
- Is Scanpy MCP server listed on the Official MCP Registry?
- Scanpy MCP server is not on the Official MCP Registry. It is listed on mcp.so.
- How many versions does Scanpy MCP server have?
- No registry surfaces explicit version metadata for Scanpy MCP server; MCP Toplist tracks 3 release tags from its GitHub repository, most recently published on Apr 11, 2025.
- Where can I find the source code for Scanpy MCP server?
- The source code for Scanpy MCP server is hosted at github.com/huang-sh/scanpy-mcp.
Do you run this server?
Community projects list the MCP servers behind real agents and apps. Publish yours and this page will link to it.