Bindingdb
Rank #42,613io.github.pipeworx-io/bindingdb
BindingDB — measured protein/small-molecule binding affinities.
Bindingdb is a Model Context Protocol (MCP) server published by pipeworx-io. It ranks #42,613 of 137,138 servers tracked on MCP Toplist. Bindingdb is listed across 2 registries — Official MCP and Glama, with 2 tracked versions. It was first listed on Sep 24, 2026 and most recently updated on Sep 25, 2026.
Ranks ahead of 94,525 of 137,138 servers on MCP Toplist.
Use Bindingdb
No credentials or required configuration declared — add it to your MCP client and go.
claude mcp add --transport http bindingdb https://gateway.pipeworx.io/bindingdb/mcp[mcp_servers.bindingdb]
url = "https://gateway.pipeworx.io/bindingdb/mcp"Add to ~/.codex/config.toml.
https://gateway.pipeworx.io/bindingdb/mcpSettings → Connectors → “Add custom connector”, then paste this URL.
{
"mcpServers": {
"bindingdb": {
"url": "https://gateway.pipeworx.io/bindingdb/mcp"
}
}
}Add to ~/.cursor/mcp.json (global) or .cursor/mcp.json (per project).
{
"servers": {
"bindingdb": {
"type": "http",
"url": "https://gateway.pipeworx.io/bindingdb/mcp"
}
}
}Save as .vscode/mcp.json in your workspace.
{
"mcpServers": {
"bindingdb": {
"serverUrl": "https://gateway.pipeworx.io/bindingdb/mcp"
}
}
}Add to ~/.codeium/windsurf/mcp_config.json.
{
"mcpServers": {
"bindingdb": {
"url": "https://gateway.pipeworx.io/bindingdb/mcp"
}
}
}Show your rank
Maintain this server? Add the live rank badge to your README — it updates automatically as the leaderboard changes.
[](https://mcptoplist.com/server/io.github.pipeworx-io%2Fbindingdb)<a href="https://mcptoplist.com/server/io.github.pipeworx-io%2Fbindingdb"><img src="https://mcptoplist.com/badge/io.github.pipeworx-io%2Fbindingdb.svg" alt="MCP Toplist: Top 50% of 137,138" /></a>Variants: append ?metric=score or ?metric=stars to the image URL.
Listed on 2 registries
pipeworx-io
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Available versions (2)
| Version | Published |
|---|---|
| 0.1.1 | Sep 25, 2026 |
| 0.1.0 | Sep 24, 2026 |
Frequently asked questions
- Who maintains Bindingdb?
- Bindingdb is maintained by pipeworx-io, which publishes 1714 MCP servers (5044 total versions) tracked on MCP Toplist.
- Is Bindingdb listed on the Official MCP Registry?
- Yes — Bindingdb is listed on the Official MCP Registry, alongside Glama.
- How many versions does Bindingdb have?
- MCP Toplist tracks 2 versions of Bindingdb, most recently published on Sep 25, 2026.
- Where can I find the source code for Bindingdb?
- The source code for Bindingdb is hosted at github.com/pipeworx-io/mcp-bindingdb.
Do you run this server?
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