PyMOL-MCP
Rank #6633glama/vrtejus/pymol-mcp
Enables direct interaction with PyMOL molecular visualization software for executing commands, manipulating structures, and analyzing molecular data through a socket connection that translates natural language to PyMOL-compatible Python code.
PyMOL-MCP is a Model Context Protocol (MCP) server published by vrtejus. It ranks #6633 of 58,900 servers tracked on MCP Toplist, and its repository has 59 GitHub stars. PyMOL-MCP is listed across 3 registries — Glama, PulseMCP and mcp.so, and ships as a single rolling release with no explicit version metadata. It was first listed on Mar 18, 2025.
Ranks ahead of 52,267 of 58,900 servers on MCP Toplist.
Use PyMOL-MCP
PyMOL-MCP doesn’t publish a machine-readable install config. Follow the setup instructions in its repository ↗, or open one of its registry listings above.
Listed on 3 registries
vrtejus
Other servers by vrtejus
View all vrtejus servers →Not versioned
This server is published through registries that do not expose explicit version metadata, and no GitHub release tags were found on the linked repository. The listing tracks a single rolling release.
Frequently asked questions
- What is PyMOL-MCP?
- Enables direct interaction with PyMOL molecular visualization software for executing commands, manipulating structures, and analyzing molecular data through a socket connection that translates natural language to PyMOL-compatible Python code.
- Who maintains PyMOL-MCP?
- PyMOL-MCP is maintained by vrtejus, which publishes 2 MCP servers (0 total versions) tracked on MCP Toplist.
- Is PyMOL-MCP an official MCP server?
- PyMOL-MCP is not on the Official MCP Registry. It is listed on Glama, PulseMCP and mcp.so.
- How many versions does PyMOL-MCP have?
- PyMOL-MCP ships as a single rolling release with no explicit version metadata.
- Where can I find the source code for PyMOL-MCP?
- The source code for PyMOL-MCP is hosted at github.com/vrtejus/pymol-mcp.