BioContextAI Knowledgebase MCP
Rank #1,451glama/biocontext-ai/knowledgebase-mcp
An MCP server that provides standardized access to biomedical knowledge bases and resources, enabling AI systems to retrieve verified information from sources like bioRxiv, EuropePMC, and various protein/gene databases.
What you can do with BioContextAI Knowledgebase MCP
BioContextAI Knowledgebase MCP is a Model Context Protocol (MCP) server published by biocontext-ai. It ranks #1,451 of 144,396 active servers on MCP Toplist, and its repository has 30 GitHub stars. BioContextAI Knowledgebase MCP is listed across 2 registries — Glama and PulseMCP, with 5 release tags tracked from its GitHub repository. It was first listed on Jul 15, 2025 and most recently updated on Dec 14, 2025.
Not verifiedMCP Toplist has not yet written a checked profile for this server, so the paragraph above is assembled from registry data only. The repository README is the authority on what it does.
What BioContextAI Knowledgebase MCP can and cannot do
Not verifiedMCP Toplist has not catalogued this server's tools or limitations. The repository README lists them.
What you need before using BioContextAI Knowledgebase MCP
The registry listing declares no required environment variables or authentication. This is declared metadata, not a verified install — the repository README is the authority.
MCP Toplist probed the public endpoint on Oct 12, 2026 and could not complete the MCP handshake (jsonrpc error). Requirements remain unverified.
Declared by Glama, last synced Oct 16, 2026. Not independently verified by MCP Toplist.
Hosted endpoint declared as public.
Connect BioContextAI Knowledgebase MCP and confirm it works
claude mcp add --transport http knowledgebase-mcp https://mcp.biocontext.ai/mcp/[mcp_servers.knowledgebase-mcp]
url = "https://mcp.biocontext.ai/mcp/"Add to ~/.codex/config.toml.
https://mcp.biocontext.ai/mcp/Settings → Connectors → “Add custom connector”, then paste this URL.
{
"mcpServers": {
"knowledgebase-mcp": {
"url": "https://mcp.biocontext.ai/mcp/"
}
}
}Add to ~/.cursor/mcp.json (global) or .cursor/mcp.json (per project).
{
"servers": {
"knowledgebase-mcp": {
"type": "http",
"url": "https://mcp.biocontext.ai/mcp/"
}
}
}Save as .vscode/mcp.json in your workspace.
{
"mcpServers": {
"knowledgebase-mcp": {
"serverUrl": "https://mcp.biocontext.ai/mcp/"
}
}
}Add to ~/.codeium/windsurf/mcp_config.json.
{
"mcpServers": {
"knowledgebase-mcp": {
"url": "https://mcp.biocontext.ai/mcp/"
}
}
}After adding the config, ask your client to list this server's tools. A tool list confirms the connection; an empty list or an error means the server did not start or needs credentials.
When to choose another server
- Skill-to-MCP#13,357
- anndata-mcp#14,003
- nucleotide_archive_mcp#39,933
- protocol-mcp#41,916
- Cellosaurus MCP Server#51,542
No task-specific alternatives are catalogued for BioContextAI Knowledgebase MCPyet; the list above is its publisher's other servers.
What changed, and when this was checked
- First listed
- Jul 15, 2025
- Latest release tag
- Dec 14, 2025
- Version history
- 5 release tags tracked (below)
- Requirements evidence
- MCP Toplist probed the public endpoint on Oct 12, 2026 and could not complete the MCP handshake (jsonrpc error). Requirements remain unverified.
- Profile checked
- Not yet — purpose, capabilities and requirements above come from registry data only
- Ranking data as of
- Oct 16, 2026
- Glama ↗listed since Apr 26, 2026 · still listed
- PulseMCP ↗listed since Jun 4, 2026 · still listed
Do you maintain BioContextAI Knowledgebase MCP? to correct or enrich this profile.
GitHub releases (5)
No registry surfaces explicit version metadata for this server. The list below shows release tags from the linked GitHub repository.
| Version | Published |
|---|---|
| 0.2.1 | Dec 14, 2025 |
| 0.2.0 | Nov 19, 2025 |
| 0.1.7 | Nov 6, 2025 |
| 0.1.6 | Nov 4, 2025 |
| 0.1.5 | Nov 4, 2025 |
Ranks ahead of 142,945 of 144,396 servers on MCP Toplist.
Show your rank
Maintain this server? Add the live rank badge to your README — it updates automatically as the leaderboard changes.
[](https://mcptoplist.com/server/glama%2Fbiocontext-ai%2Fknowledgebase-mcp)<a href="https://mcptoplist.com/server/glama%2Fbiocontext-ai%2Fknowledgebase-mcp"><img src="https://mcptoplist.com/badge/glama%2Fbiocontext-ai%2Fknowledgebase-mcp.svg" alt="MCP Toplist: Top 5% of 144,396" /></a>Variants: append ?metric=score or ?metric=stars to the image URL.
Frequently asked questions
- Who maintains BioContextAI Knowledgebase MCP?
- BioContextAI Knowledgebase MCP is maintained by biocontext-ai, which publishes 6 MCP servers (29 total versions) tracked on MCP Toplist.
- Is BioContextAI Knowledgebase MCP listed on the Official MCP Registry?
- BioContextAI Knowledgebase MCP is not on the Official MCP Registry. It is listed on Glama and PulseMCP.
- How many versions does BioContextAI Knowledgebase MCP have?
- No registry surfaces explicit version metadata for BioContextAI Knowledgebase MCP; MCP Toplist tracks 5 release tags from its GitHub repository, most recently published on Dec 14, 2025.
- Where can I find the source code for BioContextAI Knowledgebase MCP?
- The source code for BioContextAI Knowledgebase MCP is hosted at github.com/biocontext-ai/knowledgebase-mcp.
Do you run this server?
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